Steven Gay

Inferring reaction systems from ordinary differential equations

In Mathematical Biology, many dynamical models of biochemical reaction systems are presented with Ordinary Differential Equations (ODE). Once kinetic parameter values are fixed, …

François Fages
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On the subgraph Epimorphism Problem

In this paper we study the problem of deciding the existence of a subgraph epimorphism between two graphs. Our interest in this variant of graph matching problem stems from the …

Steven Gay
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Solving Subgraph Epimorphism Problems using CLP and SAT

In this work, we compare CLP and SAT solvers on the NP-complete problem of deciding the existence of a subgraph epimorphism between two graphs. Our interest in this variant of …

Steven Gay
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Inferring Reaction Models from ODEs

Francois Fages
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Automatic Curation of SBML Models based on their ODE Semantics

Francois Fages
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A graphical method for reducing and relating models in systems biology

Motivation: In Systems Biology, an increasing collection of models of various biological processes is currently developed and made available in publicly accessible repositories, …

Steven Gay
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